This is a preview instance. Do not rely on this data for real analyses.

PPD_005FMST.1

Slovakia/PPD_005FMST.1/2026-04-08
T. Sladecek

Science Park of Comenius University of Bratislava, Ilkovicova 8, 841 04 Bratislava

Sample details

Collection date
2026-04-08
Sampling location
Slovakia
Isolate name
RNA

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-22 19:53insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-05-15
NCBI update date
2026-05-16
Raw reads accession

Host

Host

Submission details

Submission ID
OZ470757.1
Submitting group
Date submitted
2026-05-22 19:48:52 UTC
Date released
2026-05-22 20:28:51 UTC
Earliest release date
2026-05-15

Alignment and QC

Length
15002 (97.6%)
# of SNPs
157
# of deleted bases
2
# of unknown bases
140

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • A134G
  • C242T
  • G513T
  • G579A
  • C688T
  • C811T
  • C998A
  • G1385A
  • T1396C
  • T1607C
  • T1633C
  • T1664C
  • G1732A
  • T1846C
  • C2074T
  • C2198T
  • C2260T
  • C2554T
Deletions

973, 4586
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:R42K
  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:H112Y
  • G:T126I
  • G:T131A
  • G:I137T
  • G:P214S
  • G:L217P
  • G:P221L
  • G:I252T
  • G:K256N
  • G:S265P
  • G:I268T
  • G:S275P
  • G:K276E
  • G:Y285H
  • G:N294D

L

  • L:Y170H
  • L:K570R
  • L:R1759K
  • L:V1965I
  • L:T1987I

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I
Deletions
N/A
Insertions
N/A

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