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PPD_004MXJM.1
Download
Download FASTA
Download metadata TSV
Ireland/PPD_004MXJM.1/2026-04-10
M. Carr,
C. Kenna,
U. Morley,
A. Crowley,
C. Bennett,
W. Banka,
L. Fahey,
A. Rice,
J. Dean,
D. Hare &
C. F. De Gascun
UCD National Virus Reference Laboratory, Dublin, Co. Dublin
Sample details
Collection date
2026-04-10
Sampling location
Ireland
Isolate name
hRSV/A/Ireland/un-NVRL-GIRL00027794/2026
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-05-22 19:21
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Lineage
Lineage
A.D.3.3
INSDC
INSDC accession
OZ474787.1
BioProject accession
PRJEB90083
BioSample accession
SAMEA122676684
NCBI release date
2026-05-19
NCBI update date
2026-05-20
Host
Host
human (Homo sapiens)
Submission details
Submission ID
OZ474787.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-05-22 19:17:32 UTC
Date released
2026-05-22 19:53:49 UTC
Earliest release date
2026-05-19
Alignment and QC
Length
15226 (100%)
# of SNPs
227
# of inserted bases
2
# of deleted bases
1
Nucleotide mutations
Mutations called relative to the
PP109421.1
reference
Substitutions
T
59
C
T
66
A
A
67
G
G
74
A
C
90
T
C
183
T
T
261
C
C
300
T
A
354
G
A
429
T
T
501
C
T
560
C
G
587
T
C
691
T
C
1012
T
G
1034
A
G
1050
A
G
1077
A
Show more
Deletions
7428
Insertions
ins_3154:A, ins_15115:T
Amino acid substitutions
Substitutions called relative to the
PP109421.1
reference
Substitutions
F
F:
T
12
I
F:
R
553
K
G
G:
P
71
L
G:
H
90
Y
G:
L
97
F
G:
L
101
F
G:
T
113
I
G:
V
131
D
G:
I
134
K
G:
N
178
G
G:
K
204
N
G:
G
224
E
G:
S
243
I
G:
N
255
D
G:
H
258
Q
G:
K
262
E
G:
I
265
L
G:
H
266
L
G:
E
271
K
G:
P
274
L
Show more
L
L:
P
171
L
L:
R
256
K
L:
Y
598
H
L:
L
835
M
L:
V
1219
I
L:
L
1438
Q
L:
N
1723
S
L:
E
1725
G
L:
G
1731
D
L:
I
1734
M
M2-1
M2-1:
P
120
L
M2-1:
S
176
P
M2-2
M2-2:
Y
24
C
M2-2:
S
44
N
M2-2:
H
45
Y
M2-2:
T
77
A
N
N:
V
352
A
NS1
NS1:
G
2
D
P
P:
L
55
P
P:
T
92
M
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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