This is a preview instance. Do not rely on this data for real analyses.

PPD_003GT8Q.1

DENV-1/India/3/2025-10-18
B. K. Pati, A. Sarfraz, M. Z. Farooque & A. Kumar

All India Institute of Medical Sciences, Microbiology

Sample details

Collection date
2025-10-18
Sampling location
India (Bihar, Vaishali)
Isolate name
3

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-22 16:20insdc_ingest_userOPEN
Data use terms URL

Lineage & Serotype

Lineage
1III_A
Serotype
DENV-1

INSDC

INSDC accession
NCBI release date
2026-04-05
NCBI update date
2026-04-05

Host

Host

Submission details

Submission ID
PZ225548.1
Submitting group
Date submitted
2026-05-22 16:18:33 UTC
Date released
2026-05-22 17:13:33 UTC
Earliest release date
2026-04-05

Alignment and QC

Length
468 (4.36%)
# of SNPs
25

Nucleotide mutations

Mutations called relative to the NC_001477.1 reference

Substitutions

  • T171G
  • T208C
  • C214T
  • T230A
  • T244C
  • T274C
  • G302A
  • G349A
  • A355G
  • A363G
  • T368C
  • G388A
  • T397C
  • T442C
  • C443T
  • C451A
  • G466A
  • G480C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001477.1 reference

Substitutions

C

  • C:V26G
  • C:L46M
  • C:G70S
  • C:N90S

prM

  • prM:S15T
  • prM:T59A
Deletions
N/A
Insertions
N/A

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