This is a preview instance. Do not rely on this data for real analyses.

PPD_003GT6U.1

DENV-2/India/1/2025-08-16
B. K. Pati, A. Sarfraz, M. Z. Farooque & A. Kumar

All India Institute of Medical Sciences, Microbiology

Sample details

Collection date
2025-08-16
Sampling location
India (Bihar, Patna)
Isolate name
1

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-22 16:20insdc_ingest_userOPEN
Data use terms URL

Lineage & Serotype

Lineage
2II_F.1.1
Serotype
DENV-2

INSDC

INSDC accession
NCBI release date
2026-04-05
NCBI update date
2026-04-05

Host

Host

Submission details

Submission ID
PZ225546.1
Submitting group
Date submitted
2026-05-22 16:18:33 UTC
Date released
2026-05-22 17:13:33 UTC
Earliest release date
2026-04-05

Alignment and QC

Length
460 (4.29%)
# of SNPs
35

Nucleotide mutations

Mutations called relative to the NC_001474.2 reference

Substitutions

  • A152C
  • G168A
  • A177G
  • G210A
  • T226C
  • A228G
  • G252A
  • A276G
  • G297A
  • T312C
  • A324G
  • T327C
  • T330C
  • T336C
  • T384C
  • T397A
  • C405T
  • G408A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001474.2 reference

Substitutions

C

  • C:E19A
  • C:S101T
  • C:M104I
  • C:L108M
  • C:A114T

prM

  • prM:G7N
  • prM:K16R
  • prM:R19K
  • prM:S28E
  • prM:A29N
  • prM:I37M
  • prM:M49I
  • prM:K52N
  • prM:R55L
  • prM:I56L
Deletions
N/A
Insertions
N/A

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