This is a preview instance. Do not rely on this data for real analyses.

PPD_003GSRQ.1

DENV-1/China/PPD_003GSRQ.1/2025-03-22
L. Lin & P. Jia

Guangdong Provincial Center for Disease Control and Prevention, Institute of Infectious Disease Control and Prevention

Sample details

Collection date
2025-03-22
Sampling location
China (GDfs)
Isolate name
D1/China/GDfs/D250017/2025

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-22 16:20insdc_ingest_userOPEN
Data use terms URL

Lineage & Serotype

Lineage
1I_K.2
Serotype
DENV-1

INSDC

INSDC accession
NCBI release date
2026-04-20
NCBI update date
2026-04-20

Host

Host

Submission details

Submission ID
PZ110955.1
Submitting group
Date submitted
2026-05-22 16:18:33 UTC
Date released
2026-05-22 17:13:33 UTC
Earliest release date
2026-04-20

Alignment and QC

Length
1485 (13.8%)
# of SNPs
111

Nucleotide mutations

Mutations called relative to the NC_001477.1 reference

Substitutions

  • G940A
  • A957G
  • C958T
  • A961G
  • T988A
  • G991T
  • G997A
  • A1006G
  • C1007T
  • G1012A
  • T1015C
  • C1055T
  • G1081A
  • T1147C
  • G1150A
  • A1175G
  • G1177A
  • G1192A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001477.1 reference

Substitutions

E

  • E:N8S
  • E:T81A
  • E:T88A
  • E:D147N
  • E:T155S
  • E:T156I
  • E:S171T
  • E:K203E
  • E:I293T
  • E:V324I
  • E:S338L
  • E:S339T
  • E:K361R
  • E:V380I
  • E:I436V
  • E:I461V
  • E:V482I
  • E:M484L
Deletions
N/A
Insertions
N/A

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