This is a preview instance. Do not rely on this data for real analyses.

PPD_003FVLZ.1

DENV-1/Pakistan/DENV2_PAKISTAN_lahore_2025/2025-10-09
U. Fatima

UVAS, human nutrition and dietetics

Sample details

Collection date
2025-10-09
Sampling location
Pakistan (punjab,lahore)
Isolate name
DENV2_PAKISTAN_lahore_2025

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-22 16:20insdc_ingest_userOPEN
Data use terms URL

Lineage & Serotype

Lineage
1V_A
Serotype
DENV-1

INSDC

INSDC accession
NCBI release date
2025-10-14
NCBI update date
2025-10-14

Host

Host

Submission details

Submission ID
PX453772.1
Submitting group
Date submitted
2026-05-22 16:18:33 UTC
Date released
2026-05-22 17:11:27 UTC
Earliest release date
2025-10-14

Alignment and QC

Length
666 (6.2%)
# of SNPs
41

Nucleotide mutations

Mutations called relative to the NC_001477.1 reference

Substitutions

  • C8285T
  • G8287A
  • A8290G
  • T8293C
  • A8371G
  • G8383A
  • C8434T
  • A8437G
  • G8458A
  • G8506A
  • C8527A
  • C8533G
  • T8539A
  • C8549T
  • A8554C
  • C8572T
  • C8596T
  • C8605T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001477.1 reference

Substitutions

NS5

  • NS5:K364R
  • NS5:R378K
Deletions
N/A
Insertions
N/A

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